Strengthen Fisheries Management in New England Act of 2011 - Amends the Magnuson-Stevens Fishery Conservation and Management Act to require the Secretary of Commerce (the Secretary) or Secretary of the Treasury to annually make available to the New England Fishery Management Council, for the funding of Council research (including cooperative research) and monitoring priorities, all sums received by the United States as fines, penalties, and forfeitures of property for violations of any provision of this Act or any other marine resource law enforced by the Secretary from violations within the Council's fishery management jurisdiction.