Clean Energy Partnership Act of 2006 - Directs the Secretary of Energy to provide grants to local governments and school districts covering up to 20% of the costs they incur in implementing clean energy projects funded by project-specific comprehensive clean energy plans to adopt cleaner or more efficient energy technologies in their buildings and vehicle fleets.
Requires the Secretary to give preference to local governments and school districts that demonstrate a prior commitment to environmental conservation and will engage in the full range of clean energy projects, including energy conservation measures, the use of alternative and renewable energy sources, and clean energy infrastructure development.